FastQCFastQC Report
Sat 31 Dec 2022
SRR1954245.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954245.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences517861
Sequences flagged as poor quality0
Sequence length51
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC15060.29081162705822605No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT14840.28656338283825195No Hit
GAGCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCT8360.16143328035901525No Hit
AAGCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCT6960.13439899895918017No Hit
AAGAGCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTT6270.12107496026926144No Hit
GCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGC5730.11064745172932504No Hit
CTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGCT5240.10118545323938277No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)