FastQCFastQC Report
Sat 31 Dec 2022
SRR1954214.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954214.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences509112
Sequences flagged as poor quality0
Sequence length51
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20830.409143764044061No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC11950.23472241864265622No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT6980.13710146293939252No Hit
GAGCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCT5180.10174578481748614No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)