FastQCFastQC Report
Sat 31 Dec 2022
SRR1954130.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954130.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1009089
Sequences flagged as poor quality0
Sequence length51
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATGAAACCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCG15480.15340569563239714No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCG13330.13209934901678644No Hit
GAATCTATCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTC12400.1228831153644525No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGC12160.12050473248643083No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)