FastQCFastQC Report
Sat 31 Dec 2022
SRR1954119.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954119.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences730580
Sequences flagged as poor quality0
Sequence length51
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATGAAACCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCG19900.2723863231952695No Hit
GAATCTATCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTC18610.2547291193298475No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGC16340.2236579156286786No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCG16040.21955158914834788No Hit
GAATCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTC12680.17356073256864407No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGC11880.16261052862109557No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC10850.14851214103862684No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCG9570.1309918147225492No Hit
GAATATGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTC7430.1017000191628569No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)