FastQCFastQC Report
Sat 31 Dec 2022
SRR1954114.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954114.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences521705
Sequences flagged as poor quality0
Sequence length51
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC20170.3866169578593266No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCG16470.3156956517572191No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCG13240.2537832683221361No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGC12300.23576542298808714No Hit
GAATCTATCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCGTCTTC11620.22273123700175387No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGC10250.19647118582340595No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCG8610.165035796091661No Hit
GAATCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCGTCTTC8040.1541100813678228No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)