FastQCFastQC Report
Sat 31 Dec 2022
SRR1954091.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954091.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences382383
Sequences flagged as poor quality0
Sequence length51
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA6660.1741709228705251No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC6180.1616180635645413No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT4770.12474403935321392No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3910.1022534997633263No Hit
GAGCTGACTCTTATACACATCTGACGCGATATCGCTCGTATGCCGTCTTCT3880.10146894605670231No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3870.10120742815449431No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)