SRR1954085.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1954085.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	637294
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1103	0.17307553499640668	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	729	0.11438990481630143	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCGAA	25	3.888843E-5	45.0	1
CTTCGAT	20	7.030919E-4	45.0	2
AGCGTAA	20	7.030919E-4	45.0	1
CGTATGT	20	7.030919E-4	45.0	8
CGTATAT	20	7.030919E-4	45.0	14
GACCGTT	20	7.030919E-4	45.0	9
TAGCGAA	25	3.888843E-5	45.0	1
ATTAACG	25	3.888843E-5	45.0	1
CGACAGG	40	6.8066583E-9	45.0	3
CGACAGA	25	3.888843E-5	45.0	21
CGTTCCC	20	7.030919E-4	45.0	12
CGTTAAG	35	1.2107921E-7	45.0	2
TGTTCGC	20	7.030919E-4	45.0	12
AACGCCC	20	7.030919E-4	45.0	17
CGAATTT	25	3.888843E-5	45.0	23
GTGTACG	20	7.030919E-4	45.0	9
ATGCGTT	40	6.8066583E-9	45.0	27
TTAGTCG	20	7.030919E-4	45.0	28
CTCGAAT	25	3.888843E-5	45.0	21
GCGTGAA	20	7.030919E-4	45.0	1