FastQCFastQC Report
Sat 31 Dec 2022
SRR1953999.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953999.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89213
Sequences flagged as poor quality0
Sequence length51
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC2000.22418257428850055No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1730.19391792675955297No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT960.10760763565848028No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)