FastQCFastQC Report
Sat 31 Dec 2022
SRR1953987.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953987.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53382
Sequences flagged as poor quality0
Sequence length51
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC2320.43460342437525756No Hit
TATAATAGGATACCTGCAATCTTTGCCAAGATACTTTTTTATTTAAAAAAA750.14049679667303586No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT660.12363718107227155No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)