FastQCFastQC Report
Sat 31 Dec 2022
SRR1953977.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953977.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77190
Sequences flagged as poor quality0
Sequence length51
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC2510.325171654359373No Hit
GAGCTGACTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCT1310.1697111024744138No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1150.14898302888975257No Hit
AAGCTGACTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCT1000.12955045990413266No Hit
TAGAGCAGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTT850.11011789091851275No Hit
GCTGTCACTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTGC840.10882238631947144No Hit
CTGTCTATTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTGCT830.10752688172043011No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)