FastQCFastQC Report
Sat 31 Dec 2022
SRR1953965.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953965.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69460
Sequences flagged as poor quality0
Sequence length51
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC1860.26778001727613016No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1230.17708033400518283No Hit
GAGCTGACTCTTATACACATCTGACGCGTCTGGTATCGTATGCCGTCTTCT750.1079758134177944No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)