FastQCFastQC Report
Sat 31 Dec 2022
SRR1953941.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953941.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84864
Sequences flagged as poor quality0
Sequence length51
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC1770.2085690045248869No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1250.1472944947209653No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1100.12961915535444946No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)