FastQCFastQC Report
Sat 31 Dec 2022
SRR1953918.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953918.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences199400
Sequences flagged as poor quality0
Sequence length51
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC4560.22868605817452356No Hit
TTTGAAAGGCCCTATTTTTATTAGGTTTTGAAGGTTTTCATTTTCTTTCTT3470.17402206619859578No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2320.11634904714142429No Hit
GCCAGAAGGTTGATGAGATTCAGGAAATTATTGAAAGTTTGGGAGGGACTA2230.11183550651955868No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)