FastQCFastQC Report
Sat 31 Dec 2022
SRR1953824.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953824.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1062853
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT21850.20557875830429984No Hit
TGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT21750.2046378944219003No Hit
AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT21250.1999335750099026No Hit
GAGATAGGGACCAAACTGTCTCGCGACGTTCTGAACCCAGCTCACGTACCA20520.19306526866838594No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT16030.15082048034864654No Hit
AAGATAGGGACCAAACTGTCTCGCGACGTTCTGAACCCAGCTCACGTACCA13420.1262639330180185No Hit
GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT11750.11055150618194615No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)