FastQCFastQC Report
Sat 31 Dec 2022
SRR1953795.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953795.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences941851
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGATAGGGACCAAACTGTCTCGCGACGTTCTGAACCCAGCTCACGTACCA23220.24653581086604995No Hit
AAGATAGGGACCAAACTGTCTCGCGACGTTCTGAACCCAGCTCACGTACCA15500.16456955505701007No Hit
GGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT12280.13038155716774735No Hit
CACTATGACCGACTTTCGTCTCTGCTCGACTTGTCAGTCTCGCAGTCAGGC10260.10893442805709184No Hit
GTGCAAGGGGTACGCTGTCAGGCCATAAAAGCCCTCCAACTGCTTGTAGGC10060.10681094992732396No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)