FastQCFastQC Report
Sat 31 Dec 2022
SRR1953793.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953793.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1098340
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT26290.239361217837828No Hit
GGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT21950.19984704189959396No Hit
AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT19470.1772675127920316No Hit
GAGATAGGGACCAAACTGTCTCGCGACGTTCTGAACCCAGCTCACGTACCA11760.10707067028424713No Hit
GGGCAGGGGCTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC11500.10470346158748657No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)