FastQCFastQC Report
Sat 31 Dec 2022
SRR1953773.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953773.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2240136
Sequences flagged as poor quality0
Sequence length51
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATGATACCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCG180060.8037904841491768No Hit
GAATCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTC131580.5873750522289718No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT113100.5048800608534482No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGC112640.5028266140984297No Hit
GAATGACTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCT35530.1586064417517508No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTC33560.14981233282265005No Hit
GAACTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCT31870.1422681480052997No Hit
GCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC24110.10762739405107548No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)