FastQCFastQC Report
Sat 31 Dec 2022
SRR1953681.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953681.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1121507
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT37880.3377598178165629No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC29010.2586698076784184No Hit
AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT12290.10958469273932307No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)