FastQCFastQC Report
Sat 31 Dec 2022
SRR1953670.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953670.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences918146
Sequences flagged as poor quality0
Sequence length51
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT24210.26368355359605117No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGTGACCTATCGTATGCCG23900.2603071842604553No Hit
GAATCTGTCTCTTATACACATCTGACGCGTGACCTATCGTATGCCGTCTTC16510.17981889590544423No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGACCTATCGTATGC14790.16108549184988008No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC12730.13864897303914628No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)