FastQCFastQC Report
Sat 31 Dec 2022
SRR1953634.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953634.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3632218
Sequences flagged as poor quality0
Sequence length51
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT435691.1995150070838259No Hit
CTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGCT45380.1249374349226836No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC41330.11378722312372219No Hit
GCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGC37930.10442655149002622No Hit
CGTTTCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTT37080.1020863835816022No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)