FastQCFastQC Report
Sat 31 Dec 2022
SRR1953632.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953632.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1150286
Sequences flagged as poor quality0
Sequence length51
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT181041.5738694550746508No Hit
CGTTTCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTT20400.17734719887054176No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCT17530.15239688216669595No Hit
CGTTCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTC13690.11901388002635865No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC12690.11032038988564583No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)