FastQCFastQC Report
Sat 31 Dec 2022
SRR1953613.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953613.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1507086
Sequences flagged as poor quality0
Sequence length51
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT211361.4024415328654105No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTT33840.22453927645801233No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCT28520.18923936656567708No Hit
CGTTCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTC21910.14537989205659133No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)