FastQCFastQC Report
Sat 31 Dec 2022
SRR1953551.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953551.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1319274
Sequences flagged as poor quality0
Sequence length51
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT68960.5227117338778753No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC38800.29410114957165834No Hit
CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT26580.2014744473096567No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA22740.17236752941390493No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)