FastQCFastQC Report
Sat 31 Dec 2022
SRR1953504.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953504.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1255838
Sequences flagged as poor quality0
Sequence length86
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA41800.33284547847731955No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT28290.2252679087589323No Hit
GAGCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTC24260.19317778248468354No Hit
AAGCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTC17090.13608443127218636No Hit
GAGAGCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCT16950.13496963780360205No Hit
GCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTG14680.11689405799155625No Hit
AAGAGCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCT14500.11546075210337639No Hit
TAGAGCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCT12610.10041104027748801No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)