FastQCFastQC Report
Sat 31 Dec 2022
SRR1953503.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953503.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1497728
Sequences flagged as poor quality0
Sequence length86
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCTTAACTTTCTCATGAATTTGCCTGAGGTTTCCAAACCCTTCACATT47270.3156113793692847No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT37180.24824267156653276No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA30590.20424269293222802No Hit
GAGAGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCT26350.1759331467395949No Hit
GAGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTC25570.17072525852491238No Hit
AAGAGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCT20940.13981176822493804No Hit
AAGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTC18950.12652497649773523No Hit
TAGAGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCT17780.11871314417571148No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)