FastQCFastQC Report
Sat 31 Dec 2022
SRR1953498.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953498.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1968362
Sequences flagged as poor quality0
Sequence length86
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA61020.31000395252499285No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT40020.20331625991560498No Hit
GAGCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTC32610.16567074552343522No Hit
AAGCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTC27200.138185963760731No Hit
GAGAGCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCT25550.12980335934142195No Hit
GCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCTG22050.1120220772398573No Hit
AAGAGCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCT21200.10770376587233446No Hit
TAGAGCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCT20560.1044523314309055No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)