FastQCFastQC Report
Sat 31 Dec 2022
SRR1953497.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953497.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2526787
Sequences flagged as poor quality0
Sequence length86
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA88180.34898074115467587No Hit
GAGCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTC57800.22874900021252284No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT44790.17726068718890828No Hit
AAGCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTC41330.163567407937432No Hit
GAGAGCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCT39800.15751228734357112No Hit
AAGAGCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCT32640.12917590600236586No Hit
TAGAGCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCT31020.1227646018441602No Hit
GCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTCTG29860.11817379145927219No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)