FastQCFastQC Report
Sat 31 Dec 2022
SRR1953495.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953495.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1647264
Sequences flagged as poor quality0
Sequence length86
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA53520.3249023835887872No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT49290.29922343959438197No Hit
CTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTGC24790.15049196728636088No Hit
GAGCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTC21710.13179429648192395No Hit
GCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTG19270.1169818559745129No Hit
GAGAGCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCT17610.10690453989160206No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)