FastQCFastQC Report
Sat 31 Dec 2022
SRR1953492.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953492.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences973665
Sequences flagged as poor quality0
Sequence length86
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA28960.297432895297664No Hit
GAGCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTC21970.22564228969922923No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT16830.17285205897305542No Hit
GAGAGCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCT16380.1682303461662892No Hit
AAGCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTC13380.13741892745451464No Hit
AAGAGCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCT11940.12262944647286284No Hit
TAGAGCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCT11670.11985641878880314No Hit
GCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTCTG10810.11102381209142774No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)