FastQCFastQC Report
Sat 31 Dec 2022
SRR1953482.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953482.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1208566
Sequences flagged as poor quality0
Sequence length86
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA42010.3476020341462526No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT35040.2899303803019446No Hit
GAGCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTC16160.13371218452281466No Hit
CTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGC15590.12899585128160151No Hit
GCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTG14270.11807381640721318No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)