FastQCFastQC Report
Sat 31 Dec 2022
SRR1953447.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953447.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences560432
Sequences flagged as poor quality0
Sequence length86
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT21190.37810117909041596No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA11380.20305764124817996No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA6470.11544665543723412No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)