FastQCFastQC Report
Sat 31 Dec 2022
SRR1953290.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953290.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences611299
Sequences flagged as poor quality0
Sequence length51
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT31310.5121879800228694No Hit
GAATCTATCTCTTATACACATCTGACGCGCTTCAGTTCGTATGCCGTCTTC9970.1630953101510063No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT9280.15180787143443716No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCGCTTCAGTTCGTATGCCG7770.1271063751126699No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCGCTTCAGTTCGTATGC6970.11401948964418393No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)