FastQCFastQC Report
Sat 31 Dec 2022
SRR1953289.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953289.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences744580
Sequences flagged as poor quality0
Sequence length51
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT37540.5041768513793011No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC14770.19836686454108354No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11960.16062746783421525No Hit
GATACTAAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT10860.14585403851835935No Hit
AGTAGGAGAAGTTTCATATGTATTTTTCCAGTGTTAAATCTCATACCTATT9520.1278573155335894No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)