FastQCFastQC Report
Sat 31 Dec 2022
SRR1953280.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953280.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences738646
Sequences flagged as poor quality0
Sequence length51
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20880.2826793890442783No Hit
GAATCTATCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTC11950.16178250474516886No Hit
GATACTAAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT10430.14120431167298003No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCG9990.135247466309978No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC8860.1199492043549955No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)