FastQCFastQC Report
Sat 31 Dec 2022
SRR1953277.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953277.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1148039
Sequences flagged as poor quality0
Sequence length51
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT68330.5951888394035394No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20450.178129837052574No Hit
GAATCTATCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTC16020.13954229777908242No Hit
GAGTCCAACTGTGTTGAGCACATCGAGTCACGTACTCTGGCTATCGCCCGC13060.11375920156022573No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)