FastQCFastQC Report
Sat 31 Dec 2022
SRR1953236.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953236.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1049539
Sequences flagged as poor quality0
Sequence length51
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30040.2862209027010907No Hit
GAATCTATCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTC12590.11995742892831995No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC11550.11004831645131814No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)