FastQCFastQC Report
Sat 31 Dec 2022
SRR1953225.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1953225.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences675958
Sequences flagged as poor quality0
Sequence length51
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT35230.5211862275466819No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC13370.1977933540249542No Hit
AATGTAAGGGGAACACACCCACCTACCCATGACTTGCTTTGTGACTCTGTC11040.16332375680145808No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10750.15903354942170964No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA8350.12352838489965352No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)