SRR3137915_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3137915_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2860251
Sequences flagged as poor quality	0
Sequence length	75
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGGGG	7920	0.27689877566689075	RNA PCR Primer, Index 46 (96% over 28bp)
ATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGGGGGGG	4009	0.14016252419805114	RNA PCR Primer, Index 46 (96% over 28bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	2750	44.916077	1
GTATCAA	6015	36.53888	1
AATCTCG	2400	30.618355	36
TATGCCG	2490	30.481535	43
CTCGTAT	2435	29.894892	39
GCGAATC	2575	29.475348	33
TCGTATG	2655	28.847084	40
CGAATCT	2625	28.782484	34
TCTCGTA	2540	28.659079	38
ATCTCGT	2550	28.546688	37
CGTATGC	2680	28.44926	41
CAACGCA	7715	28.13026	5
ATCAACG	7760	27.833746	3
ATGCCGT	2740	27.826283	44
TATCAAC	7830	27.760689	2
TGCCGTC	2700	27.727419	45
TCAACGC	7790	27.682262	4
GGCGAAT	2970	27.413788	32
CCGTCTT	2685	27.36836	47
AACGCAG	8130	26.907005	6