SRR3137890_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3137890_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3637290
Sequences flagged as poor quality	0
Sequence length	75
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	12838	0.3529550846921746	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGAGATGTTGGAACTCTACCAATTGGAG	7654	0.21043139260273447	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAACCAATGAGAGAGCCTCACTTAGT	6175	0.1697692512832356	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACCCCAGCACTTAGA	5825	0.16014670262750563	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACCCCAGCACTT	5164	0.14197383216625564	No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAACCAATGAGAGAGCCTCACTTAGTTAC	4937	0.1357329220381108	No Hit
GTCTTAGCAGTAGTTTATAAGGAATATATCCCATTTTTAGTTATAATGATGCCTTATGTGATAGATGCCTCTTTA	4620	0.1270176422556354	No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGCTGGTCGTCTACCAGCTCGATAATTG	3690	0.10144915582755293	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTACCCG	975	38.26614	1
CGACGAG	850	36.53015	24
ATCGTCA	930	32.644478	10
ACCTGGG	5415	31.98579	3
TACCTGG	6270	31.603058	2
ATGCGAC	1070	29.986593	21
TGCGACG	1070	29.019283	22
TGGTCGT	810	28.96116	51
CTGGGGG	2610	28.946474	5
TAGGCAT	1265	28.634583	5
GCTCGAT	820	28.607979	64
GTACCTG	7225	28.019169	1
ACCCGGG	1220	27.7152	3
CCTGGGG	3590	26.907145	4
AGTAGGC	1245	26.895966	2
ACGAGTC	1190	25.803045	26
GTCGTCT	925	25.733538	53
GCATCGT	1225	25.064095	8
GTCCTAC	1185	25.03814	30
GTCAGCG	1000	24.838455	43