SRR3137885_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3137885_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4551226
Sequences flagged as poor quality	0
Sequence length	75
%GC	43

$Per base quality graph$

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	25117	0.551873275464677	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGAGATGTTGGAACTCTACCAATTGGAG	9568	0.2102290679478453	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAACCAATGAGAGAGCCTCACTTAGT	7068	0.15529881398990075	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACCCCAGCACTTAGA	7009	0.15400245999649326	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACCCCAGCACTT	6387	0.14033581281175667	No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAACCAATGAGAGAGCCTCACTTAGTTAC	6131	0.13471095480646314	No Hit
GTCTTAGCAGTAGTTTATAAGGAATATATCCCATTTTTAGTTATAATGATGCCTTATGTGATAGATGCCTCTTTA	5389	0.1184076554317452	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCTCGAT	665	29.569315	64
TGCGACG	985	28.022305	22
CGACGAG	975	27.955227	24
GTACTAG	1310	26.369337	1
ATGCGAC	1115	25.992886	21
GTACCCG	430	25.707037	1
ATCGTCA	1105	25.599981	10
CTCGATA	790	24.453947	65
TGGTCGT	820	24.400694	51
CTGGTCG	865	23.131294	50
ACATACG	1910	22.215689	57
TACCTGG	4555	22.207586	2
GCATCGT	1250	22.078423	8
ACGAGTC	1240	21.980682	26
CGCACTA	1275	21.91608	58
GCGACGA	1245	21.892887	23
GCGCTGG	925	21.257938	47
GTCCTAC	1335	20.932697	30
TCGTCTA	975	20.875431	54
GCTCGTC	980	20.769154	39