SRR3137873_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3137873_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4866921
Sequences flagged as poor quality	0
Sequence length	75
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	17260	0.3546390007152366	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGAGATGTTGGAACTCTACCAATTGGAG	7167	0.14725942746964663	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAACCAATGAGAGAGCCTCACTTAGT	6227	0.12794536833451786	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACCCCAGCACTTAGA	5669	0.1164802140819627	No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAACCAATGAGAGAGCCTCACTTAGTTAC	5179	0.10641224708599134	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACCCCAGCACTT	5052	0.1038027944156069	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCGTCA	565	0.0	42.130257	10
GTACCCG	1215	0.0	40.092342	1
GCTCGAT	610	0.0	39.02229	64
TAGTGCA	410	0.0	38.705032	67
TGGTCGT	625	0.0	38.637722	51
GTAGGCA	4015	0.0	37.213326	3
AGTAGGC	4125	0.0	36.321415	2
CTAGTGC	525	0.0	36.140728	66
TAGGCAG	4175	0.0	35.862095	4
TATGCCG	400	0.0	35.360416	50
ACTAGTG	415	0.0	34.9136	65
CTCGTGC	650	0.0	33.967228	66
ACCTGGG	5740	0.0	33.12347	3
TACCTGG	6600	0.0	32.84828	2
GCGCTGG	790	0.0	32.751236	47
GTCAGCG	760	0.0	32.682285	43
CCTGGGG	2145	0.0	32.488262	4
CGGTCCG	75	1.671071E-6	32.199093	28
CGACATC	485	0.0	32.008423	66
TAGGCAT	950	0.0	31.956339	5