SRR3137867_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3137867_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3555595
Sequences flagged as poor quality	0
Sequence length	75
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	13831	0.3889925596137918	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGAGATGTTGGAACTCTACCAATTGGAG	6377	0.17935113532334251	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAACCAATGAGAGAGCCTCACTTAGT	5049	0.14200154967030834	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACCCCAGCACTTAGA	4859	0.13665785895187726	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACCCCAGCACTT	4313	0.1213017793083858	No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAACCAATGAGAGAGCCTCACTTAGTTAC	4252	0.11958617334088949	No Hit
GTCTTAGCAGTAGTTTATAAGGAATATATCCCATTTTTAGTTATAATGATGCCTTATGTGATAGATGCCTCTTTA	3640	0.10237386428994302	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTACCCG	1040	38.53119	1
TACCTGG	5885	32.202957	2
GCTCGAT	520	31.18008	64
ACCTGGG	5870	29.857758	3
CGACGAG	675	29.646547	24
GTACCTG	6785	28.766455	1
ACCCGGG	1270	28.25278	3
ATCGTCA	715	27.984455	10
TACCCGG	1455	27.046541	2
CTGGTCG	675	26.06485	50
TGCGACG	770	25.540773	22
TGGTCGT	650	25.475147	51
CCTGGGG	3815	25.41012	4
ATGCGAC	845	25.315405	21
CTGGGGG	2595	25.258	5
CTCGATA	640	24.794796	65
GCTCGTC	695	24.322046	39
CGTACGA	310	23.369339	60
CGCACTA	820	22.71793	58
GTCGTCT	790	22.707277	53