SRR1931070_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1931070_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	300488
Sequences flagged as poor quality	0
Sequence length	101
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATAAGCAGTGGTATCAACGCAGAGTACATAAGCAGTGGTATCAACG	619	0.20599824285828386	No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT	607	0.20200473895796173	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC	420	0.139772636511275	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	407	0.13544634061925934	No Hit
CATTAATAGCATGATGGTGATTGTTTTGAAAACCATAGGAGGAAACCTCC	377	0.12546258086845397	No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC	353	0.1174755730678097	No Hit
GTATAAAATCAGGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATC	339	0.11281648518410053	No Hit
GCTTATGTACTCTGCGTTGATACCACTGCTTATGTACTCTGCGTTGATAC	332	0.11048694124224595	No Hit
GAGTAGGGATGAGCATAAACCAACAACTCTCAAAGAAGATGGGAAGCTAT	316	0.10516226937514975	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCTGGG	425	0.0	54.639706	3
TACCTGG	425	0.0	50.17932	2
GTACTAG	135	0.0	45.636337	1
TAAGTGT	45	9.722434E-4	42.125847	6
GTAAGAC	45	9.722434E-4	42.125847	3
CCTGGGG	420	0.0	39.49298	4
GTCTATA	85	3.6943493E-7	39.02836	1
GTACCTG	595	0.0	36.638866	1
CTGGGGG	450	0.0	33.70068	5
GCATCGT	190	0.0	32.425816	8
GATATCG	45	2.4212866E-5	31.64705	88-89
ATTAATA	135	1.2178134E-8	31.594387	2
GTATATA	80	4.5462628E-4	29.619738	1
ATATAAC	85	6.482119E-4	27.8774	3
TACGGGC	205	3.274181E-11	27.741411	4
GTATTAA	120	5.4605134E-6	27.645088	1
GGGCTAT	120	5.4605134E-6	27.645088	6
TATATAA	70	0.008475827	27.080904	2
TGTAGGC	70	0.008475827	27.080904	2
CATGGGT	105	6.997156E-5	27.0809	4