SRR1781499_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781499_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	572411
Sequences flagged as poor quality	0
Sequence length	76
%GC	67

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	196861	34.391547332249026	No Hit
CTTATACACATCTGACGCTGCCGACGAACCGCCCAGTGTAGATCTCGGTG	5720	0.9992819844482372	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTATACG	20	7.954243E-5	69.94835	2
CCGTATC	760	0.0	59.89229	55
CGTATCA	770	0.0	59.57441	56
CGCCGTA	770	0.0	59.10413	53
TCGCCGT	785	0.0	58.856365	52
GCCGTAT	775	0.0	58.727947	54
GTGGTCG	865	0.0	57.86409	48
CTCGGTG	840	0.0	57.467617	44
TCTCGGT	825	0.0	57.23047	43
GTCGCCG	835	0.0	57.00877	51
ATCTCGG	825	0.0	56.806538	42
GATCTCG	835	0.0	56.126225	41
CGGTGGT	885	0.0	55.76055	46
TCGGTGG	885	0.0	55.741055	45
TGGTCGC	855	0.0	55.67523	49
GGTCGCC	885	0.0	53.787933	50
GGTGGTC	925	0.0	53.73235	47
GTATCAT	855	0.0	53.651806	57
GTAGATC	890	0.0	53.443684	38
TTGCGCC	20	0.00695854	52.484196	27