SRR1781481_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781481_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	437579
Sequences flagged as poor quality	0
Sequence length	76
%GC	74

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	214479	49.014920734313115	No Hit
CTTATACACATCTGACGCTGCCGACGAGCTCTTGAGTGTAGATCTCGGTG	4680	1.0695211607504018	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACGTA	15	0.002220462	70.02793	53
TCGACGT	15	0.0022214707	70.01992	52
CTGCCGT	15	0.0022295516	69.95585	40
GCCGTAT	675	0.0	56.028767	54
TATCGGT	25	2.3968518E-4	55.964687	43
CGCCGTA	680	0.0	55.61042	53
TCGCCGT	680	0.0	55.604053	52
GTGGTCG	705	0.0	55.5932	48
CGTATCA	690	0.0	55.330925	56
TGGTCGC	705	0.0	54.612965	49
TCGGTGG	725	0.0	54.523556	45
CCGTATC	690	0.0	54.30324	55
GTCGCCG	705	0.0	54.122677	51
GTATCAT	720	0.0	53.511944	57
ATCTCGG	700	0.0	53.46626	42
GATCTCG	700	0.0	53.46626	41
GGTCGCC	720	0.0	52.989056	50
TCTCGGT	710	0.0	52.71321	43
GCGTCAA	20	0.0069602286	52.47889	7
TCATTAA	745	0.0	52.192364	60