SRR1781451_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781451_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	347819
Sequences flagged as poor quality	0
Sequence length	76
%GC	79

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	193541	55.64417124998921	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGACCC	15	0.0022239748	69.99697	24
TCGGCAG	15	0.002226516	69.97683	31
GATGTCG	20	7.94516E-5	69.956696	41
TATACGC	15	0.0022316047	69.93656	3
TTGTGCG	20	7.962164E-5	69.926506	2
CGTATCA	90	0.0	66.136826	56
TCGCCGT	95	0.0	62.637897	52
GTATCAT	115	0.0	60.893234	57
CGCCGTA	100	0.0	59.51457	53
TGGTCGC	160	0.0	56.872543	49
GTCGCCG	130	0.0	56.53602	51
CCGTATC	100	0.0	56.01371	55
GTATGCG	25	2.4011392E-4	55.941208	2
CGATGTG	45	2.703382E-8	54.426426	32
TTCGATG	45	2.703382E-8	54.426426	30
GTGGTCG	200	0.0	54.247654	48
CGACGAA	65	3.6379788E-12	53.84383	22
ATCTCGG	190	0.0	53.38032	42
GCCGTAT	105	0.0	53.34639	54
CGGTGGT	230	0.0	53.258568	46