SRR1781419_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781419_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	354640
Sequences flagged as poor quality	0
Sequence length	76
%GC	77

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	188168	53.058876607263706	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACTATG	25	2.3914149E-4	55.987473	7
TCGATGT	25	2.3947524E-4	55.97167	31
CGCCGTA	45	2.689194E-8	54.463005	53
CCGTATC	40	7.451963E-7	52.5179	55
GCCGTAT	40	7.451963E-7	52.5179	54
CGCAAGT	20	0.0069426014	52.510487	12
TAGCACG	20	0.0069503584	52.495663	50
CGGGTTC	20	0.006954239	52.48825	27
AACCGAA	20	0.006954239	52.48825	7
CGTATCA	35	2.0803256E-5	50.017044	56
CGACGAA	30	5.876262E-4	46.662807	22
ACGCGAT	30	5.8926357E-4	46.63648	41
TGGTCGC	55	1.310018E-7	44.54177	49
TGTGCGG	40	4.6097397E-5	43.715534	3
CGCGTCG	35	0.0012559751	39.991047	7
GTCGCCG	75	3.52411E-8	37.34079	51
GTGGTCG	75	3.5328412E-8	37.330246	48
TCGCCGT	60	1.2125161E-5	35.00699	52
CTGCCGG	80	6.2194886E-8	35.00699	18
GGTCGCC	80	6.23495E-8	34.99711	50