SRR1781395_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781395_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	306257
Sequences flagged as poor quality	0
Sequence length	76
%GC	96

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	240363	78.48408362910888	No Hit
CTTATACACATCTGACGCTGCCGACGAACGTGGGCGTGTAGATCTCGGTG	2615	0.8538580342653392	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	691	0.22562749586131908	No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	560	0.18285296336083748	No Hit
GGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	512	0.16717985221562284	No Hit
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	437	0.14269061605122493	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	415	0.1355071067763349	No Hit
GGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	400	0.1306092595434553	No Hit
GGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	383	0.12505836601285847	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	317	0.10350783818818836	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCAGTAT	15	0.0022202965	70.024185	56
GCGAGTA	15	0.0022202965	70.024185	34
GTGGGTC	20	7.905804E-5	70.02418	38
GCAGTGT	20	7.905804E-5	70.02418	33
CAGTGTA	20	7.905804E-5	70.02418	34
CATGAAA	15	0.0022217361	70.01274	61
CAGTAAG	15	0.0022217361	70.01274	61
GGATCAT	15	0.0022217361	70.01274	57
TCAGTAA	15	0.0022217361	70.01274	60
AGTAAGA	20	7.912205E-5	70.01274	62
GATCATT	15	0.0022217361	70.01274	58
CAGGAGA	20	7.912205E-5	70.01274	61
TCATAAA	20	7.912205E-5	70.01274	60
GGAGCAT	15	0.0022217361	70.01274	57
ATGAGGA	15	0.0022217361	70.01274	59
AGGGCGT	15	0.002224617	69.989876	31
CGCAGTG	15	0.002224617	69.989876	32
AAGGTCT	15	0.002224617	69.989876	27
CTCTGTG	15	0.002224617	69.989876	32
GTATGCG	15	0.0022260586	69.97845	2