SRR1781381_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781381_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	910897
Sequences flagged as poor quality	0
Sequence length	76
%GC	67

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	357371	39.232866064988684	No Hit
CTTATACACATCTGACGCTGCCGACGAGCTCTTGAGTGTAGATCTCGGTG	12415	1.362942242646534	No Hit
TCTTATACACATCTGACGCTGCCGACGAGCTCTTGAGTGTAGATCTCGGT	1303	0.14304581088750978	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGCTA	15	0.002220569	70.03325	49
CGCTACG	15	0.002220569	70.03325	51
CGTGACG	15	0.002221053	70.029396	46
TATGCGC	35	2.9881448E-7	59.962597	3
TTGTGCG	100	0.0	59.472694	2
ATCTCGG	2290	0.0	54.751175	42
GATCTCG	2290	0.0	54.751175	41
TCTCGGT	2280	0.0	54.684097	43
TGTGCGC	90	0.0	54.410503	3
CGTATCA	2260	0.0	54.37825	56
TGGTCGC	2295	0.0	54.01257	49
CCGTATC	2235	0.0	53.895832	55
CTCGGTG	2340	0.0	53.874687	44
CGGTGGT	2425	0.0	53.85766	46
TCGGTGG	2440	0.0	53.816532	45
CGTCTGG	195	0.0	53.815536	9
TCGCCGT	2245	0.0	53.811737	52
GTGGTCG	2390	0.0	53.767338	48
GGTCGCC	2300	0.0	53.742905	50
TGCCGGC	235	0.0	53.592415	19