SRR1781379_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781379_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	275604
Sequences flagged as poor quality	0
Sequence length	76
%GC	96

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	227090	82.39720758769829	No Hit
CTTATACACATCTGACGCTGCCGACGAGCTCTTGAGTGTAGATCTCGGTG	3212	1.1654402693719974	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	502	0.1821453970189112	No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	391	0.14187021959042684	No Hit
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	384	0.13933034353637827	No Hit
GGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	355	0.12880799988389138	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	341	0.12372824777579425	No Hit
GGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	326	0.11828565623140448	No Hit
TCTTATACACATCTGACGCTGCCGACGAGCTCTTGAGTGTAGATCTCGGT	277	0.10050652385306454	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCTAGCA	15	0.0022204076	70.02142	69
GCGGCTA	15	0.0022204076	70.02142	66
GCGGTCT	15	0.0022204076	70.02142	38
GTCTGTT	15	0.0022204076	70.02142	41
TAATGCC	15	0.0022204076	70.02142	58
TCAACAA	15	0.0022204076	70.02142	33
TGGAGAT	15	0.0022204076	70.02142	37
GTATAGT	15	0.0022204076	70.02142	52
TCTGTTA	15	0.0022204076	70.02142	42
TAGTAAT	15	0.0022204076	70.02142	55
TCTCGGG	20	7.905944E-5	70.02142	43
ATAGTAA	15	0.0022204076	70.02142	54
GCCGGAT	15	0.0022204076	70.02142	54
GTTAGTA	15	0.0022204076	70.02142	45
GGTAGCA	15	0.0022204076	70.02142	56
CTAGCAC	15	0.0022204076	70.02142	70
AGGTTGC	15	0.0022204076	70.02142	33
GGCTAGC	15	0.0022204076	70.02142	68
CGGCTAG	15	0.0022204076	70.02142	67
CTGTTAG	15	0.0022204076	70.02142	43